@Barrien Siegfried - The problems you mentioned are with writers. Not FJ. Not the Factory. Not Tech. Not Chaos itself. If you encounter submissions being used in ways that you are saying they are, that make the character into a 'God' the simple and more effective solution is to report the sub/writer for abuse, rather than wasting wind/words complaining about the Factory in this vein.
I can personally say, from experience with [member="Alric Kuhn"] , [member="Bianca OOC"] and others that the FJ's typically do consider such flaws in subs(and often blatantly point out the where/how to creators of the tech at times), and ultimately it is left to the maturity of our community to control and police itself. If you chose not to report abuse of a submission/tech piece, then you are in fact as much of a problem as the person utilizing it. I can also say, that with arguably one of my more line-crossing subs (that multiple people seem to think is OP) [member="Reverance"] found a very simple flaw no one had even thought of, which if exploited makes the tech next to useless except in PVE, and even then it's so-so.
I tend to welcome the challenge of encountering some sort of new/bizzare tech. It makes me think outside my comfort zone to develop tech to respond to it, or write in a way to overcome it. Rev's response to my shoulder-cannon in our duel is a PERFECT example of how to respond to questionable tech. He pointed out what I was doing in PM, outlined his response and why, and we hashed it out like adults. And that is how it should be handled, and if that fails and you're still not happy? Report it if it's that bad. I can't stress that enough.
In the end? It's the WRITERS that are the perpetrators of this 'God' complex, not tech itself. And you allow it to happen even when you apparently recognize it, you are just as much a part of the issue as well.